Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14236g00001 ATGAACTGCCACTCGTACTTGTGCAATAACTTGAAGGGCACAAAGATTGGTGATGTGATGGGGGATTTATGGTTAAGAGGACAGGAGGAGTGTGTGGAACATTATGCATCTGTATTCGTGAGAGAGAGTTGGGGAAAACTGGCTCCTCTTTTAACTGATGAGGATGAGGGTTTGCAGGAAGCAGTGCAATTGGGTGGTGCGGCAAAATAG 210 0.4619 MNCHSYLCNNLKGTKIGDVMGDLWLRGQEECVEHYASVFVRESWGKLAPLLTDEDEGLQEAVQLGGAAK 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14236g00001 69 Gene3D Exocyst complex component Exo70 1 69 - -
Trme14236g00001 69 Pfam Exo70 exocyst complex subunit 1 55 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme14236g00001 69 SUPERFAMILY Cullin repeat-like 1 55 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14236g00001 Trme-Chr14236 392 683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14236g00001 1 54 EXO70 exocyst subunit family AT4G31540 53.704 7.52e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14236g00001 K07195 - dcr:108207967 120.553