Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14230g00001 ATGATAAAATTTGCTTTACAGATATCAGGAACAGCATTGGTTTTGGATAAAATCATCAACCATGTGCAATCTCTTCAGCATGAAGTGGAGATTTTATCAATGAAACTAGCAGCAGTTAACCCAATAATTGATTCCAACCTTGAAAGCATATTGGCTACAGAAGGTTTGTCTCTCATGGACAGCAACTTCCCTACCACAGTTGCACCCGTCGTGTGGCCGGAAATCCCACACAATGGAAACAGACAGCAATTTCAGCTACCGTGGCAATCTGATGCATTCCACCAACCACTTTGGGGGAGGGAAGAAAACAACCCTAATTTCATGACCCCAGAAAACTCACTTTTGAGTTACGACTCATCGGCAAATTCAGGTAG 374 0.4251 MIKFALQISGTALVLDKIINHVQSLQHEVEILSMKLAAVNPIIDSNLESILATEGLSLMDSNFPTTVAPVVWPEIPHNGNRQQFQLPWQSDAFHQPLWGREENNPNFMTPENSLLSYDSSANSG 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14230g00001 124 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 8 108 IPR024097 GO:0006355
Trme14230g00001 124 MobiDBLite consensus disorder prediction 99 124 - -
Trme14230g00001 124 MobiDBLite consensus disorder prediction 105 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14230g00001 Trme-Chr14230 1 1482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14230g00001 7 103 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 53.333 2.31e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14230g00001 - - vvo:131637109 225.713