Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1422160g00001 CCCAAAGTGAAGCAGCTATTGCAAGAATTTTTCAAGGGGAAGGAATTATGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTATTCAGGCTGCTTTGCTTAGCAACGGCATTAAGAGTGTTCCAAACTTGATTTTGCAAGATGTTACTCCTCTGTCACTTGGCATAGAAGTAAAGGAAGATCTCATGAGT 201 0.4279 PKVKQLLQEFFKGKELCKSINPDEAVAYGAAIQAALLSNGIKSVPNLILQDVTPLSLGIEVKEDLMS 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1422160g00001 67 PRINTS 70kDa heat shock protein signature 20 40 - -
Trme1422160g00001 67 PRINTS 70kDa heat shock protein signature 46 65 - -
Trme1422160g00001 67 PANTHER HEAT SHOCK PROTEIN 70KDA 1 66 IPR013126 GO:0005524|GO:0140662
Trme1422160g00001 67 FunFam heat shock 70 kDa protein-like 11 39 - -
Trme1422160g00001 67 Pfam Hsp70 protein 1 66 IPR013126 GO:0005524|GO:0140662
Trme1422160g00001 67 SUPERFAMILY Actin-like ATPase domain 1 38 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1422160g00001 Trme-Chr1422160 2 202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1422160g00001 1 67 Calmodulin-binding Proteins AT1G56410 70.588 2.33e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1422160g00001 K03283 - lja:Lj0g3v0197429.1 107.071