Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme142203g00001 ATGACGGTAATGTTCGTAACTACATTTCTGATGGCACTAGTCATAATCTTCGTCTGGCAGAAAAGCATTCTCGTTGCTTCAATATTCCTTTTGTTCTTTTGGGTGATAGAAGGTGTGTATCTATCAGCGGCGTTCCTAAAAGTGCACCAGGGAGGATGGGTTCCTCTTGTCTTGTCCTTCTTCTTTTTGATTGTTATGTATGTATGGCATTACGGTATTCGTAGGAAGTACAAATATGATCTACACAACAAAGTTTCATTGAAATGGTTACTAGGTTTAGGCCCTAGTCTCGGAATTGTCCGTGTCCCAGGGATAGGTCTCATCTACTCGGAACTTGCAACAGGAATACCAGCGATATTCACCCACTTCGTAACTAACCTCCCTGCATTTCACAAGGTGTTGGTTTTTGTTTGTGTGAAATCAGTTCCGGTTCCACATGTCTCACCAGAAGAACGTTTTCTGATTGGCCGAGCTTGTCCGAGACCGTATCGAATGTATAGGTGCATTGTTAGATACGGGTACAAAGACATTAAAAAGGACGACGGTG 547 0.4278 MTVMFVTTFLMALVIIFVWQKSILVASIFLLFFWVIEGVYLSAAFLKVHQGGWVPLVLSFFFLIVMYVWHYGIRRKYKYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGIPAIFTHFVTNLPAFHKVLVFVCVKSVPVPHVSPEERFLIGRACPRPYRMYRCIVRYGYKDIKKDDG 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme142203g00001 182 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 181 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trme142203g00001 182 Pfam K+ potassium transporter 2 176 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme142203g00001 Trme-Chr142203 19 565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme142203g00001 1 182 Inorganic Solute Cotransporters AT3G02050 80.769 3.92e-100 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme142203g00001 K03549 - gmx:100776888 347.436