Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme142046g00001 GATGCTATAGCTACTCTCCATAACCTTACAACCTGCCGAGAGATTATTCCATTGATTGTATCTTCTGGTGTTATATTCTCGTTGCTTGAACTTATTCACGGCTCGGTAAAATCATCTTTGTTGGCTGAGAAAGCAATAGGGTTGCTAGAAAATATTGTTTCTTCATCAGAGAGTGCACTTTGTGAGGCTGCTAGTACCGGAGGAGCGATTAGGATATTGGTTGAGACTATTGAAGATGGATCTTCACTAGGAAAAGAGCATGCAGTTGGATTGCTTCAGTTAAGCGTCGATGGAACGTGGAGAGCTAAATCCGTGGCTGGAGAATTGTTGTTGCTTCTAAGAGACTGCTCTAGTTATAGCTCGAGGCGGAAACAAATTAATCATGAGCTTATAGAACAGATGATGGAAGAAATTGATGCAGAAGGCGACAAATTGGCAGATACTACTTTGAGATTGGTAGAGGAGATGATTGCAAAGCTCAATACATGA 489 0.4131 DAIATLHNLTTCREIIPLIVSSGVIFSLLELIHGSVKSSLLAEKAIGLLENIVSSSESALCEAASTGGAIRILVETIEDGSSLGKEHAVGLLQLSVDGTWRAKSVAGELLLLLRDCSSYSSRRKQINHELIEQMMEEIDAEGDKLADTTLRLVEEMIAKLNT 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme142046g00001 162 PANTHER U BOX DOMAIN-CONTAINING 1 134 - -
Trme142046g00001 162 Gene3D - 1 158 IPR011989 -
Trme142046g00001 162 SUPERFAMILY ARM repeat 2 106 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme142046g00001 1 115 U-box Gene Family AT1G67530 30.935 2.27e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme142046g00001 - - lja:Lj2g3v0922610.1 246.899