Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme142044g00001 ATGTATCAACAAGCACCATTGTTGGAACAAGAAGAAAACAAGGAAGAAAACATTTTTTGCTTCAAAAACTTTGTGGCTCCTAGAGATTATTCTTTGGAGCAACAACAACATCATCAAGTGAATAATAGTGTTGTTGATGATGGTTCTGTTGGAACAGTTAATGGTTGTGGAGAGTTACAATCTCTAAGTCTTTCAATGAGTCCTGGTTCACAATCAAGTTGTGTTACTGTTCCAACTCAGATTTCATCTTCTGGAAATGATTCTATGGTTGTTGAAGCTAAAAAGAGAGGACATGGTAAAGTTGGAAAAAAGCAACCTGTTCATAGGAAATCTATTGATACATTTGGACAAAGAACTTCTCAGTTCAGAGGAGTTACAAG 380 0.3579 MYQQAPLLEQEENKEENIFCFKNFVAPRDYSLEQQQHHQVNNSVVDDGSVGTVNGCGELQSLSLSMSPGSQSSCVTVPTQISSSGNDSMVVEAKKRGHGKVGKKQPVHRKSIDTFGQRTSQFRGVT 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme142044g00001 126 ProSitePatterns TonB-dependent receptor proteins signature 1. 1 94 IPR010916 -
Trme142044g00001 126 MobiDBLite consensus disorder prediction 66 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme142044g00001 Trme-Chr142044 145 524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme142044g00001 10 126 AP2-EREBP Transcription Factor Family AT4G37750 39.726 8.47e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme142044g00001 K09285 - gmx:100798179 139.813