Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1420314g00001 ATGGTTAGTTCCGTAAGTTTAGAAGGGTATGCCTCAGGAACAGCACGTGGAGGAGTTCCCTCAGCACGCATTGCTATCTACAAAGCGTGTTGGGAATTTCATTGCAATGAGGCTGATATCCTTGCGGCGTTTGATGCAGCAATTGCTGATGGCGTTGATGTTCTTTCTGTTTCTATT 177 0.4576 MVSSVSLEGYASGTARGGVPSARIAIYKACWEFHCNEADILAAFDAAIADGVDVLSVSI 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1420314g00001 59 SUPERFAMILY Subtilisin-like 12 59 IPR036852 GO:0004252|GO:0006508
Trme1420314g00001 59 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 59 IPR045051 -
Trme1420314g00001 59 Gene3D Peptidase S8/S53 domain 2 59 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1420314g00001 Trme-Chr1420314 1 177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1420314g00001 2 59 Subtilisin-like Serine Gene Family AT5G03620 68.966 1.14e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1420314g00001 - - ming:122067984 81.2629