Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme141928g00001 ATGAGGATTAGATTGAAGGTTGGTTTAGCACTTGGTGTTGTTGTTTTGTGTATTGGTGTTGGGAGTTTGGTTTTGTGTTTTGTTGAGGATTTGAATTGGGTTGATTCGATTTATTTGGCGGTTATGTCTGTTACAACGGTTGGTTATGGAGATCGAGCGTTTAAGACGCTTCCTGGGAGATTGTTTGCTGCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNGCTTTTCTTTATTTGGCTGAGGCTAGAATTGATAGAAGACATAGGAGATTGGCTAAGAAGGTTTTGCATAGAGAAATTACTATTGAAGATTGGCTTGCTGCTGATATCAACAACACCGGTTTTATTAGGTAA 360 0.35 MRIRLKVGLALGVVVLCIGVGSLVLCFVEDLNWVDSIYLAVMSVTTVGYGDRAFKTLPGRLFAAXXXXXXXXXXXXAFLYLAEARIDRRHRRLAKKVLHREITIEDWLAADINNTGFIR 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme141928g00001 119 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 2 101 IPR003280 GO:0005267|GO:0016020|GO:0071805
Trme141928g00001 119 Pfam Ion channel 13 63 IPR013099 -
Trme141928g00001 119 Gene3D - 2 68 - -
Trme141928g00001 119 SUPERFAMILY Voltage-gated potassium channels 2 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme141928g00001 Trme-Chr141928 25 384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme141928g00001 1 118 Ion Channels AT4G01840 68.644 1.55e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme141928g00001 K05389 - gmx:100801488 167.933