Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme141716g00001 ATGTATGCAAGTGAAAGACAGTTATCACGCCTAAGATTAGCATATCTAAAAGCAGTCCTAAACCAAGAGATAGGAGCTTTTGATACAGAATTAACAAGTGGAAAAGTCATCACAGGAATAAGCAAACACATGAGTGTAATACAAGATGCCATTGGTGAGAAGTTAGGTCACTTCACCTCTAGCTGTGCAACTTTCTTTGCTGGAATTGTGATCGCCGCGATATGCTGTTGGGAAGTGGCACTTCTATGTTTAGTGGTTGTCCCTCTTATTCTTATAATTGGAGCAACTTACACTAAGAAAATGAACA 307 0.3909 MYASERQLSRLRLAYLKAVLNQEIGAFDTELTSGKVITGISKHMSVIQDAIGEKLGHFTSSCATFFAGIVIAAICCWEVALLCLVVVPLILIIGATYTKKMN 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme141716g00001 102 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 102 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme141716g00001 102 Pfam ABC transporter transmembrane region 2 101 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme141716g00001 102 Gene3D ABC transporter type 1, transmembrane domain 1 102 IPR036640 GO:0005524|GO:0016020
Trme141716g00001 102 PANTHER ABC TRANSPORTER B FAMILY 1 101 IPR039421 -
Trme141716g00001 102 SUPERFAMILY ABC transporter transmembrane region 2 101 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme141716g00001 Trme-Chr141716 1 399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme141716g00001 1 98 Calmodulin-binding Proteins AT2G36910 43.878 3.01e-25 96.3