Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme141708g00001 ATGACAGTACAGCCTGAAAACTTGCTTATTGACAGCAAGGGAAACCTAAAAGTGTCTGATTTTGGATTAAGTGCATTGAATAAGTCTGATGATGTTTTAAACACAAGGTGTGGATCCCCGTGCTACGTGGCTCCCGAGGTAAGATTGAGTGGAGGAGGAGAGTGTTTGGGAGTCCGAGGGAGCACTTGTGCTGATGAACAAAGGGTATGA 210 0.4524 MTVQPENLLIDSKGNLKVSDFGLSALNKSDDVLNTRCGSPCYVAPEVRLSGGGECLGVRGSTCADEQRV 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme141708g00001 69 Pfam Protein kinase domain 3 47 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme141708g00001 69 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 51 - -
Trme141708g00001 69 ProSiteProfiles Protein kinase domain profile. 1 69 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme141708g00001 69 Gene3D Transferase(Phosphotransferase) domain 1 3 59 - -
Trme141708g00001 69 SUPERFAMILY Protein kinase-like (PK-like) 4 51 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme141708g00001 Trme-Chr141708 44 454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme141708g00001 3 52 CBL-interacting serine-threonine protein kinases AT5G57630 68.000 3.11e-20 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trme141708g00001 Pkinase 2.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme141708g00001 - - tpra:123908220 109.768