Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1416148g00001 ATGCCTTTTCCGGAGGATCGATTGCCAGGAAGATGCCAACCCTTGGCCTACCAAGAAGCTGTCCTACTAGTCAATCCTAAGAATCCACAATTGAAAGGAGAG 102 0.4804 MPFPEDRLPGRCQPLAYQEAVLLVNPKNPQLKGE 34
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1416148g00001 34 Pfam Rhamnogalacturonate lyase family 1 34 IPR010325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1416148g00001 Trme-Chr1416148 61 162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1416148g00001 1 34 Polysaccharide Lyase AT1G09890 70.588 4.31e-11 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1416148g00001 K18195 - qsa:O6P43_019544 63.1586