Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme141569g00001 ATGGCAATAAAAACAGATTTGACAAAATTGAAGTATATTCAAGCCATTATCAAGGAAACATTGCGTTTGTACCCAGCCGCACCACTCAATATTCCTCATGAGTCCATTGAAGATTGTACTGTTGGTGGATACCATGTGCCTTCCGGGACGCGTCTTTTAACCAATGTTTCGAAACTTCAACGAGATCCAATGTTATACGTGGATCCGTTGGAGTTTCGACCAGAGAGATTTCTCACAACTCACAAGGATGTTGATGTCAAGG 262 0.416 MAIKTDLTKLKYIQAIIKETLRLYPAAPLNIPHESIEDCTVGGYHVPSGTRLLTNVSKLQRDPMLYVDPLEFRPERFLTTHKDVDVK 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme141569g00001 87 PRINTS E-class P450 group I signature 14 32 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme141569g00001 87 PRINTS E-class P450 group I signature 55 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme141569g00001 87 SUPERFAMILY Cytochrome P450 5 82 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme141569g00001 87 Pfam Cytochrome P450 5 82 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme141569g00001 87 Gene3D Cytochrome P450 3 87 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme141569g00001 87 PANTHER CYTOCHROME P450 82C3-RELATED 4 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme141569g00001 Trme-Chr141569 1 262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme141569g00001 5 87 Cytochrome P450 AT4G31940 63.095 8.38e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme141569g00001 - - gmx:100787630 152.14