Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme141540g00001 AAGAGTCTTGTTGAAGCTGAATGCCCTGGTGTAGTCTCTTGTGCTGATATATTAGCTTTATCTGCTAGAGACTCTGTTGCAGCCACAGGTGGTCCCTATTGGAAAGTTCCAACAGGTAGAAGGGATGGAGTCATATCTAATTTGGTGGAAGCAAGAAACCAAATTCCTGCTCCATTTCACAACATCACTGTCCTCCAAAAACTCTTTCAAGATCAAGGACTTGATTTAAAAGACTTAGTCCTCCTCTCTG 250 0.424 KSLVEAECPGVVSCADILALSARDSVAATGGPYWKVPTGRRDGVISNLVEARNQIPAPFHNITVLQKLFQDQGLDLKDLVLLS 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme141540g00001 83 PRINTS Haem peroxidase superfamily signature 30 42 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme141540g00001 83 PRINTS Haem peroxidase superfamily signature 12 29 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme141540g00001 83 PRINTS Haem peroxidase superfamily signature 78 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme141540g00001 83 Gene3D - 1 55 - -
Trme141540g00001 83 ProSiteProfiles Plant heme peroxidase family profile. 1 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme141540g00001 83 PANTHER PEROXIDASE 25-RELATED 1 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme141540g00001 83 Gene3D Peroxidase, domain 2 56 83 - -
Trme141540g00001 83 Pfam Peroxidase 1 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme141540g00001 83 SUPERFAMILY Heme-dependent peroxidases 1 83 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme141540g00001 83 PRINTS Plant peroxidase signature 11 21 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme141540g00001 83 PRINTS Plant peroxidase signature 30 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme141540g00001 83 PRINTS Plant peroxidase signature 77 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme141540g00001 Trme-Chr141540 13 567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme141540g00001 1 83 Peroxidase AT3G21770 68.675 3.01e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme141540g00001 K00430 - gmx:100803114 148.288