Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14148g00001 GAGTTAGGGATCGATGACTCTGTTAATGGCGATGCAGTTAGAGATGCTGTCATGGTTGAAGTCGGTAGCATACCTGATGAAAACATAGAAGAAGAAAGTTCTGCTGAACCAACGTACAAACAAGACCAAGATGATAACGTGACTCAGGATTCTTCTGGAGGAGCGTTAACAATTCCCTCAGCAGTTCCCACACTACCGGACGCTTCTGCTGATGAGCCCTATGTGGGTCAGGAGTTCGAGTCGGAAGCAGCAGCACATGCCTTTTATAATGCATACGCAGCCGAGGTTGGATTCATCATACGCGTAAGCAAACTCTCACGATCAAGGCGTGACGGAACTGCTATTGGACGCGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCTGATAAACGCGAAAAGATCGTAAGACAAAGGGCAGAAACAAGGGTTGGTTGCAGGGCAATGATTATGATGAGGAAAATTAATTCTGGTAAATGGGTTATTACAAAGTTTGTAAAGGAGCACACACATCCCTTGAATCCCGGAAGTAATAGAAGGGATTGCATGTTTGAACAATATCCGTCTCAGAACGAACATGATAAAATTCGCGAACTATCTCAGCAGTTGGCAATAGAGAAGAAGCGATCAGCGACTTATAAAAGACAACTTGAAGTGATATTTGATTATATCGAGGAGCATAATGTGACCCTTTCACACAAAATACAGCACATAGTAGACAGTGTGAAGCAGATGGAACCTAAAGAAGAAGATAATCATTGA 762 0.4318 ELGIDDSVNGDAVRDAVMVEVGSIPDENIEEESSAEPTYKQDQDDNVTQDSSGGALTIPSAVPTLPDASADEPYVGQEFESEAAAHAFYNAYAAEVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNPGSNRRDCMFEQYPSQNEHDKIRELSQQLAIEKKRSATYKRQLEVIFDYIEEHNVTLSHKIQHIVDSVKQMEPKEEDNH 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14148g00001 253 MobiDBLite consensus disorder prediction 40 58 - -
Trme14148g00001 253 Pfam FAR1 DNA-binding domain 88 175 IPR004330 -
Trme14148g00001 253 MobiDBLite consensus disorder prediction 21 72 - -
Trme14148g00001 253 Coils Coil 196 216 - -
Trme14148g00001 253 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14148g00001 Trme-Chr14148 213 1164 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme14148g00001 FAR1 1.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14148g00001 - - gmx:100806900 368.237