Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme141457g00001 ATGAGGGAGCCTAACAAAAAGACTAGGATTTGGCTANNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCCACGATGTTGCGGCCTTGGCATTGAGGGGCCGCTACGCCTGTCTCAATTTCGCAGACTCAGTATGGCGTCTCCCTATACCTGCAACCTCTGAGACAAAAGATATTCAAAAGGCAGCTACAGAAGCGGCCGAGGCTTTTAGACCGGAAAAGACTTTAAAGACTAATGACATTGAAACAGTTATAGCCGTTGTCGCGGCAAAGGAGTTGAGTATGTTTGTTTTGGAAGTGGAAGAAGAGGCCGAGGCTTTTAGACCGGAAAAGATTTTAATTGAAACAGTTATAGCTGTTGTCGCCACAAAGGAGTTGAATATGTTTGTTGTGGAAGTGGCAGAAGAAGAGGAGGAAGATATGCCGGAAATGTGGAGGAATATGGTGCTAATGTCCCCTACACAT 465 0.4215 MREPNKKTRIWLXXXXXXXXXXXXHDVAALALRGRYACLNFADSVWRLPIPATSETKDIQKAATEAAEAFRPEKTLKTNDIETVIAVVAAKELSMFVLEVEEEAEAFRPEKILIETVIAVVATKELNMFVVEVAEEEEEDMPEMWRNMVLMSPTH 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme141457g00001 155 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 155 IPR045277 GO:0003700
Trme141457g00001 155 ProSiteProfiles AP2/ERF domain profile. 1 42 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme141457g00001 Trme-Chr141457 1 465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme141457g00001 1 104 AP2-EREBP Transcription Factor Family AT4G25470 49.091 1.24e-26 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme141457g00001 - K09286 vvo:131653181 154.836