Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme141117g00001 AAAGTTCCAGCTATAATAGTTTTTGGAGATTCTTCTGTTGATTCAGGTAACAACAATTTCATTCCAACAATAGCAAAGAGTAATTTTCCACCATATGGTAAAGATTTTCCAAATGGAAATCCAACTGGTAGATTTTCAAATGGCAGAATTGCCCCTGATTTCATCTCTGAAGCATTTGGACTTAAACCAACTATTCCTGCTTATTTAGATCCTTCTTATAGTATATCTGAATTTGCTACTGGTGTTTGTTTTGCTTCTGCTGGTACTGGATTTGATAACGCTACTGCAAGTGTTGCTGTAAGTTCATAA 309 0.3495 KVPAIIVFGDSSVDSGNNNFIPTIAKSNFPPYGKDFPNGNPTGRFSNGRIAPDFISEAFGLKPTIPAYLDPSYSISEFATGVCFASAGTGFDNATASVAVSS 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme141117g00001 102 Pfam GDSL-like Lipase/Acylhydrolase 5 93 IPR001087 GO:0016788
Trme141117g00001 102 Gene3D SGNH hydrolase 1 102 IPR036514 -
Trme141117g00001 102 PANTHER GDSL ESTERASE/LIPASE EXL3 2 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme141117g00001 Trme-Chr141117 2 310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme141117g00001 3 98 Pollen Coat Proteome AT1G75910 47.917 2.79e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme141117g00001 - - lja:Lj6g3v0933410.1 186.037