Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme141045g00001 AGAACAATAGACAAAGAAGGTTGGTTGCACACGGGTGACATTGGTTACATTGACAATGATGATGAATTGTTCATAGTTGATAGACTTAAAGAATTGATTAAATACAAAGGTTTTCAAGTTGCTCCAGCTGAACTTGAAGCCATTATTCTTTCACATCCTCATATCTCTGATGTTGCTGTCGTCCCGTAA 189 0.3704 RTIDKEGWLHTGDIGYIDNDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPHISDVAVVP 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme141045g00001 62 Gene3D - 1 30 IPR042099 -
Trme141045g00001 62 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 62 - -
Trme141045g00001 62 Gene3D - 31 62 IPR045851 -
Trme141045g00001 62 Pfam AMP-binding enzyme 3 35 IPR000873 -
Trme141045g00001 62 SUPERFAMILY Acetyl-CoA synthetase-like 4 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme141045g00001 Trme-Chr141045 1 189 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme141045g00001 2 61 Monolignol Biosynthesis Gene Families AT3G21240 81.667 1.43e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme141045g00001 K01904 - aew:130795981 120.553