Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1409583g00001 ATGACTGGCGATGGAGTGAATGATGCACCTGCCTTAAAGATAGCTGACATAGGTATTGCAGTAGCAGATTCTACAGATGCTGCTCGAAGC 90 0.4667 MTGDGVNDAPALKIADIGIAVADSTDAARS 30
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1409583g00001 30 PRINTS P-type cation-transporting ATPase superfamily signature 25 30 - -
Trme1409583g00001 30 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Trme1409583g00001 30 PANTHER CALCIUM-TRANSPORTING ATPASE 1 30 - -
Trme1409583g00001 30 Gene3D - 1 30 IPR023214 -
Trme1409583g00001 30 SUPERFAMILY HAD-like 1 29 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1409583g00001 Trme-Chr1409583 1 90 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1409583g00001 1 29 Primary Pumps ATPases AT4G30190 93.103 1.58e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1409583g00001 K01535 - jre:109016511 60.8474