Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme140856g00001 GAGGGTAAGATAGCTGTAGTTGTTGGTGCCGTGACAGATGACATTAGGGTTTATGAAGTACCTGCAATTAAGGTAACTGCTCTAAGGTTCACAGAAACTGCCAGAGCTAGAATTGAGAAGGCTGGTGGGGAGTGTCTCACCTTTGATCAGCTGGCTCTTAGAGCTCCTTTA 171 0.462 EGKIAVVVGAVTDDIRVYEVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPL 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme140856g00001 57 Gene3D - 1 57 - -
Trme140856g00001 57 SUPERFAMILY Ribosomal proteins L15p and L18e 2 56 IPR036227 -
Trme140856g00001 57 PANTHER 60S RIBOSOMAL PROTEIN L18 1 57 IPR000039 GO:0003735|GO:0005840|GO:0006412
Trme140856g00001 57 Pfam Ribosomal protein 60S L18 and 50S L18e 1 56 IPR021131 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme140856g00001 1 57 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 84.211 7.05e-31 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme140856g00001 K02883 - qsu:112028786 110.153