Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14081g00001 ATGGCTGGAATCGGAAAAACAACTCTTGCTTCCGTCTTGTATGATAGAGTCTCCTATCAGTTTGATGCAAGCTGTTTTATTGAGAATGTAAGCAAAATTTATAAAGAGGGTGGTGCTACTGCTGTAAACAAACAAATCCTTCGGCAAACCATGGATGAAAAAAACCTAGAGACATACAGCCCTTCTGAAATATCTGGAATCATACATAAAAGACTTCGCAACAGAAAGTTTCTTGTAGTTCTTGACAATGTNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNATCATTACAACCAGGGATATGCATATTCTAAGAGTGTTTGGAGCACAGTTATCGGTATCTCACGATACATGCTTGTCGTACGATGTGTATGAGGTTCCACTATTGAACAGCAATGATGCTCGCAAACTTTTCTATAGAAAAGCTTTCAGAAATGAGGATCCCACTAGCGGATGTGTGAAGCTAATTCCTGAGGTACTAAAATATGCTCAAGGTCTTCCATTAGCAGTTCGAGTAGTGGGTTCTTTCTTGTGTACTCGAAATGCTAACCAATGGAGAGATGCTTTGTATAGATTGAGGAATAATCCAGACAACAAAGTTATGGATGTGCTTCAGATAAGTTTTGAGGGATTACATTCAGAGGAAAAAGAAATATTTCTGCATATTGCTTGTTTCTTTAAAGGGGAGAAGGAAGATTATGTGAAGCGAATTCTAGATGCTTGTGGGTTGCACCCTCACATTGGAATTCCAAGTTTGATTGAGAGGTCACTCATAACCGTTATAAATCAGGAAATTCNTATGCATGAAATGTTGCAAGAATTGGGGAAGAAAATTGTTCGGCAACAATTTCCTTTCCAACCTGGATCGTGGAGTAGATTGTGGCTTTATGAGGATTTCTACTCTGTTATGACTACAGAAACG 957 0.3584 MAGIGKTTLASVLYDRVSYQFDASCFIENVSKIYKEGGATAVNKQILRQTMDEKNLETYSPSEISGIIHKRLRNRKFLVVLDNVXXXXXXXXXXXXXXXXXXXXXXIITTRDMHILRVFGAQLSVSHDTCLSYDVYEVPLLNSNDARKLFYRKAFRNEDPTSGCVKLIPEVLKYAQGLPLAVRVVGSFLCTRNANQWRDALYRLRNNPDNKVMDVLQISFEGLHSEEKEIFLHIACFFKGEKEDYVKRILDACGLHPHIGIPSLIERSLITVINQEIXMHEMLQELGKKIVRQQFPFQPGSWSRLWLYEDFYSVMTTET 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14081g00001 319 Pfam NB-ARC domain 1 214 IPR002182 GO:0043531
Trme14081g00001 319 Gene3D - 140 224 IPR042197 -
Trme14081g00001 319 SUPERFAMILY "Winged helix" DNA-binding domain 210 314 IPR036390 -
Trme14081g00001 319 Coils Coil 81 84 - -
Trme14081g00001 319 Gene3D - 1 124 IPR027417 -
Trme14081g00001 319 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 314 IPR044974 GO:0006952
Trme14081g00001 319 PRINTS Disease resistance protein signature 71 85 - -
Trme14081g00001 319 PRINTS Disease resistance protein signature 175 189 - -
Trme14081g00001 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 234 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14081g00001 Trme-Chr14081 166 1122 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14081g00001 1 306 WRKY Transcription Factor Family AT5G45050 32.573 3.03e-46 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14081g00001 - - vvo:131643801 489.96