Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme140813g00001 GTCAAAGTTGGTTGCTGCACTTTGGATGTTCTCAAGCAGATCAGTGGGGAGGAGATATCACGAATTGCAGCAGATGGAAAACCTATTGATCGTTTGAGTAGACTTGCAAACCATATTCTTAACCAACAGAGTTTCTATCCACTTTACCCTCCAGCAGAAAGTGTTCCCTTGGACTTTTCTCTGGCGCCAGAAGCCCTTCAACTCTCATTGGTTCCAGATGTTCTTATCTTACCTTCAGACATCAAGTACTTTGTCAAGGTAAAATTTTTGGTTTAA 276 0.4167 VKVGCCTLDVLKQISGEEISRIAADGKPIDRLSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDVLILPSDIKYFVKVKFLV 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme140813g00001 91 Pfam DNA polymerase alpha/epsilon subunit B 1 86 IPR007185 GO:0003677|GO:0006260
Trme140813g00001 91 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 87 IPR016722 -
Trme140813g00001 91 Gene3D - 25 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme140813g00001 Trme-Chr140813 77 427 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme140813g00001 1 87 Core DNA Replication Machinery Family AT1G67630 66.667 7.34e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme140813g00001 K02321 - lja:Lj0g3v0140269.1 167.162