Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme140802g00001 ATGCATCATTGCTTATACGATATAACCGGAAGCGATTTAGGAACGTTGAGATTGCTGAGTCAGCTTCGGCCAAAACTAATCACCACCGTTGAACAGGATCTTAGCCATGCTGGTAGCTTCCTCGCGAGGTTTGTGGAAGCTTTGCATTATTACAGCGCGTTGTTCGACGCGCTTGGGGATGGATTGGGTGTGGACAGTGTTGAGAGGCATATGGTGGAGCAGCAACTGTTGGGGTGTGAGATAAGGAACATTATTGCCGTTGGTGGGCCCAAGAGGACTGGTGAGGTTAAAGTTGAGAGATGGGGGGATGAATTAAAACGGGTCGGGTTTCGACCCATTTCGCTTAGGGGTAACCCGGCTGCACAAGCGAGTTTATTGTTGGGGATGTTTCCTTGGAGAGGGTATACTTTGGTGGAAGAGAATGGTTCTCTCAAGCTTGGTTGGAAGGATCTTTCACTGTTGATTGCTTCTGCTTGGCAGCCGTCGGATTTGAT 494 0.4899 MHHCLYDITGSDLGTLRLLSQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGVDSVERHMVEQQLLGCEIRNIIAVGGPKRTGEVKVERWGDELKRVGFRPISLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme140802g00001 164 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 155 IPR005202 -
Trme140802g00001 164 ProSiteProfiles GRAS family profile. 1 160 IPR005202 -
Trme140802g00001 164 Pfam GRAS domain family 14 160 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme140802g00001 Trme-Chr140802 1 494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme140802g00001 1 161 GRAS Transcription Factor Family AT3G54220 68.323 6.76e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme140802g00001 GRAS 5.2e-43 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme140802g00001 - - gmx:100816249 319.316