Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14049g00001 ACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACGTTGGTGTTCTACAAAATCACACCCAAGTTGCGGTTAAAATACTTTCACCATCTTCCATGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTATTGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGATTTTGTGACGAAGGTGAAATCAAAGCATTGGTATATGAATACATGGCCAATGGAAATCTCAAACAACACTTATTAGTGAAAAATACAAATATCTTAAAATGGAATGAAAGACTTAACATTGCAGTCGATGCAGCACACGGATTGGATTATCTGCATAATGGATGTAAACCACCTATTATGCACAGAGATATGAAACCTTCCAACATATTACTAGATGAAAATATGCGTGCCAAGATTGCAGATTTTGGTCTAAGTAGAGCTTTTGGTGATGATATTGATTCTCATATATCCACTCGCCCTGCCGGAACACTTGGTTACGCTGATCCTGAGTAA 507 0.3669 TIIGEGGFGKVYVGVLQNHTQVAVKILSPSSMQGYKEFQSEAQLLLIVHHRNLVSLIGFCDEGEIKALVYEYMANGNLKQHLLVKNTNILKWNERLNIAVDAAHGLDYLHNGCKPPIMHRDMKPSNILLDENMRAKIADFGLSRAFGDDIDSHISTRPAGTLGYADPE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14049g00001 168 Gene3D Phosphorylase Kinase; domain 1 3 73 - -
Trme14049g00001 168 PANTHER OS07G0107800 PROTEIN-RELATED 2 168 - -
Trme14049g00001 168 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme14049g00001 168 SMART serkin_6 2 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme14049g00001 168 SUPERFAMILY Protein kinase-like (PK-like) 2 168 IPR011009 -
Trme14049g00001 168 FunFam receptor-like protein kinase FERONIA 1 72 - -
Trme14049g00001 168 ProSitePatterns Protein kinases ATP-binding region signature. 3 25 IPR017441 GO:0005524
Trme14049g00001 168 Pfam Protein tyrosine and serine/threonine kinase 3 149 IPR001245 GO:0004672|GO:0006468
Trme14049g00001 168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Trme14049g00001 168 FunFam Os07g0541700 protein 73 161 - -
Trme14049g00001 168 Gene3D Transferase(Phosphotransferase) domain 1 74 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14049g00001 Trme-Chr14049 1 962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14049g00001 2 168 Receptor kinase-like Gene Family AT2G19230 62.874 1.88e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trme14049g00001 PK_Tyr_Ser-Thr 9.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14049g00001 - - tpra:123886800 298.13