Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme140427g00001 ATGGTAGGAGGAGGAGGGGAGAAGAAGTGTCTGAATTCTGAGCTATGGCATGCATGTGCGGGGCCCTTAGTGTCCCTACCGACCGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTATCTGCTACAACCAACCGAGAAATTGATGGGCACATACCAAATTACCCTAGCTTGCCACCTCAGTTGGTTTGCCAACTTCACAATGTCACAATGCAT 228 0.5088 MVGGGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGHIPNYPSLPPQLVCQLHNVTMH 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme140427g00001 76 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 76 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme140427g00001 Trme-Chr140427 22 387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme140427g00001 6 76 B3 DNA Binding Superfamily AT1G30330 83.099 5.41e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme140427g00001 - - tpra:123913862 162.925