Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14036g00001 ATGGGCTGCTGTTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGCTAATGGGCCCTTAGATAAATGGCTACATCACATACCAAGGGGAGGTCGCAGCTTAGATTGGGCTATGAGGATGAAAATTGCAACAACGCTTGCTCAAGGAATTGCGTTTCTGCATGACAAGGTTAAGCCGCAAGTTGTTCACCGAGATATACGAGCTAGTAATGTGCTGCTTGACGAGGAATTTGGAGCGCACCTTATGG 253 0.4585 MGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEEFGAHLM 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14036g00001 84 Gene3D Transferase(Phosphotransferase) domain 1 1 84 - -
Trme14036g00001 84 SUPERFAMILY Protein kinase-like (PK-like) 2 83 IPR011009 -
Trme14036g00001 84 ProSiteProfiles Protein kinase domain profile. 1 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme14036g00001 84 ProSitePatterns Tyrosine protein kinases specific active-site signature. 63 75 IPR008266 GO:0004672|GO:0006468
Trme14036g00001 84 PANTHER OS07G0668900 PROTEIN 1 83 - -
Trme14036g00001 84 Pfam Protein tyrosine and serine/threonine kinase 1 78 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14036g00001 Trme-Chr14036 8 1393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14036g00001 2 84 Receptor kinase-like Gene Family AT1G52310 89.157 3.40e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Trme14036g00001 PK_Tyr_Ser-Thr 1.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14036g00001 - - vra:106762676 179.104