Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme140349g00001 CGGGTATCAGAGATGATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTATAGAAGACAAATTGCAGAAAGGGGTTCCTGATTGCATTGATAAACTTGCTCAAGCTGGTCTCAAGATTTGGGTATTGACGGGGGATAAGATGGAAACTGCAATCAACATTGGGTCTGTCAAACACAAATTATCTAACCTCATTTTCCTGCAGTTTGCTTCGACAAGGCATGAAGCAGATCTGTATAACTACAAATTCAGACTCGCCATCCGATGA 267 0.4195 RVSEMMEKELILVGATAIEDKLQKGVPDCIDKLAQAGLKIWVLTGDKMETAINIGSVKHKLSNLIFLQFASTRHEADLYNYKFRLAIR 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme140349g00001 88 Gene3D - 9 76 IPR023214 -
Trme140349g00001 88 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 61 - -
Trme140349g00001 88 SUPERFAMILY HAD-like 6 62 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme140349g00001 Trme-Chr140349 1 460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme140349g00001 1 55 Primary Pumps ATPases AT3G13900 92.727 1.06e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme140349g00001 K01530 - cave:132186781 106.686