Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14027g00002 ATGGACACTGGTGTGGATGGGGATGATGAAGCTGTTGAGCACAACAATCCTGCTTCTTCAAGCTTGACAGGCTCGTCTAATAGCTCTGGTTCAATGCTCAAATATCTAGACGATGAAAAAGAATGGGTGATGTTAGTGAACGACTCGGACTCACAAGAGTGTTTGGAAATATTGAATGATATGGGGACACATAATGCAAGGTTTCTTGTTCGCGATACGCCTTGTACTTTTGGCAGCTCTGGTAGTAGCGGTTGCTAG 258 0.4457 MDTGVDGDDEAVEHNNPASSSLTGSSNSSGSMLKYLDDEKEWVMLVNDSDSQECLEILNDMGTHNARFLVRDTPCTFGSSGSSGC 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14027g00002 85 Pfam PB1 domain 31 72 IPR000270 GO:0005515
Trme14027g00002 85 PANTHER PROTEIN NLP8 31 84 IPR045012 GO:0003700
Trme14027g00002 85 SUPERFAMILY CAD & PB1 domains 27 76 - -
Trme14027g00002 85 MobiDBLite consensus disorder prediction 14 32 - -
Trme14027g00002 85 MobiDBLite consensus disorder prediction 1 32 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14027g00002 33 83 NLP Transcription Factor Family AT2G43500 70.588 3.26e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14027g00002 - - jre:108980290 91.2781