Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme140181g00001 ATGGTTTTATTGGCTTCATATCGAGTTCAAAAGGCTCGGAAGAAGGATGAATTGAGGGAAAAATATGTAGAAAGTCTTCCNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGAGCCTCTGAGCATCAATGTCGCTACGTTCGAGAAGCCTTTGCGCAAGTTGACGTTCGCACATCTTCTCGAGGCTACCAACGGTTTCAGCTCTGAAAGTTTGATAGGCTCGGGAGGTTTCGGTGAAGTGTATAAGGCTAAGATGAAAGACGGCAGTATTGTTGCTATCAAGAAACTCATCCGTGTCACAGGCCAGGGAGATAGAGAGTTCATAGCCGAAATGGAAACGATTGGGAAGATTAAGCACAGGAACCTTGTTCCACTACTTGGTTACTGTAAAGTTGGAGATGAAAGG 414 0.4058 MVLLASYRVQKARKKDELREKYVESLPXXXXXXXXXXXXXEPLSINVATFEKPLRKLTFAHLLEATNGFSSESLIGSGGFGEVYKAKMKDGSIVAIKKLIRVTGQGDREFIAEMETIGKIKHRNLVPLLGYCKVGDER 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme140181g00001 138 SUPERFAMILY Protein kinase-like (PK-like) 53 136 IPR011009 -
Trme140181g00001 138 Pfam Protein kinase domain 70 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme140181g00001 138 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Trme140181g00001 138 FunFam serine/threonine-protein kinase BRI1-like 2 32 138 - -
Trme140181g00001 138 ProSiteProfiles Protein kinase domain profile. 69 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme140181g00001 138 Gene3D Phosphorylase Kinase; domain 1 33 138 - -
Trme140181g00001 138 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 9 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme140181g00001 Trme-Chr140181 1 414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme140181g00001 1 138 Receptor kinase-like Gene Family AT1G55610 74.638 6.41e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Trme140181g00001 Pkinase 1.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme140181g00001 - - thj:104815676 214.542