Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme14014g00001 ATGAAACAGGCAGTAGTAGAGGAGCCTCAAGCTTTCTCTTCTTTCAGAGAACGCCTTTACCATTTGCAGAGAACCGAAAATGAACGGGTTTGCTTTGGTAGATCTGGCATACATGGATGGGGCCTCTTTGCACGTAGGAATATTCAAGAAGGAGAAATGGTTCTTGAATATCGTGGCGAACAAGTAAGACGCAGTGTTGCTGATCTGAGGGAGGCGCGCTATAGAGCAGAAGGGAAAGATTGCTACCTGTTTAAGATAAGTGAAGAAGTGGTGGTAGATGCCACCGATAAAGGGAATATAGCACGGCTAATAAATCATTCTTGTATGCCAAATTGCTATGCAAGGATCATGAGTGTGGGGAATGATGAGAGCCGGATTGTACTCATCGCTAAGACTAATGTAGCTGCTGGTGACGAGCTAACCTACGACTACTTATTCGATCCTGATGAGCCAGATGAATTTAAAGTCCCTTGCATGTGTAAAGCTCCGAATTGCAGGAAATTCATGAATTAG 513 0.4405 MKQAVVEEPQAFSSFRERLYHLQRTENERVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSVADLREARYRAEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGNDESRIVLIAKTNVAAGDELTYDYLFDPDEPDEFKVPCMCKAPNCRKFMN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme14014g00001 170 SMART set_7 28 151 IPR001214 GO:0005515
Trme14014g00001 170 ProSiteProfiles Post-SET domain profile. 154 170 IPR003616 -
Trme14014g00001 170 ProSiteProfiles SET domain profile. 28 145 IPR001214 GO:0005515
Trme14014g00001 170 SUPERFAMILY SET domain 18 170 IPR046341 -
Trme14014g00001 170 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 29 170 IPR044570 GO:0042800|GO:0051568
Trme14014g00001 170 Pfam SET domain 39 144 IPR001214 GO:0005515
Trme14014g00001 170 CDD SET_SETD1-like 15 166 - -
Trme14014g00001 170 FunFam Histone-lysine N-methyltransferase 2 170 - -
Trme14014g00001 170 Gene3D SET domain 14 170 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme14014g00001 Trme-Chr14014 421 1502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme14014g00001 34 170 C2H2 Transcription Factor Family AT2G23740 36.364 5.21e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trme14014g00001 SET 3.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme14014g00001 - - qsa:O6P43_019925 335.109