Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme140129g00001 ATGGTACCTACCAAAGAAGAAGAGGCTAAACTCTTCAATTATAAAGGCAACATCAATGAATTGGGGTCCGCAGAAAGGTTTGTGAGAGCAGTGCTTAGTGTACCATTTGCTTTTCAAAGAGTTGAAACCATGCTTTACAAAGAGACTTTTGATGATGAAGTTGTTCACCTAAGGAACTCTTTTTCAATGCTTGAG 195 0.3846 MVPTKEEEAKLFNYKGNINELGSAERFVRAVLSVPFAFQRVETMLYKETFDDEVVHLRNSFSMLE 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme140129g00001 65 Pfam Formin Homology 2 Domain 1 65 IPR015425 -
Trme140129g00001 65 PANTHER FORMIN-RELATED 1 65 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme140129g00001 65 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 64 - -
Trme140129g00001 65 Gene3D Formin, FH2 domain 1 65 IPR042201 -
Trme140129g00001 65 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 65 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme140129g00001 Trme-Chr140129 232 426 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme140129g00001 1 65 FH2 protein (formin) Gene Family AT3G05470 76.923 1.81e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme140129g00001 - - gmx:100811929 119.783