Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1400830g00001 CTTTGCAAGAGCATCAACCCTGACGAGGCTGTTGCTTATGGAGCTGCTATTCAGGCTGCTATCATGAGTAATGAACATGATAAGCTTGAGGATCATGTGTTGGTGGATGTCAATCCCCTTTCACTTGGTTTGGAAACTGCAGGTGGAGTCATGACTGCCCTCATTCCAAGGAACACTGAAATCCCAACCCGAAAGGAGAAAAT 203 0.4631 LCKSINPDEAVAYGAAIQAAIMSNEHDKLEDHVLVDVNPLSLGLETAGGVMTALIPRNTEIPTRKEK 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1400830g00001 67 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 17 67 IPR029047 -
Trme1400830g00001 67 FunFam heat shock 70 kDa protein-like 1 24 - -
Trme1400830g00001 67 Pfam Hsp70 protein 2 66 IPR013126 GO:0005524|GO:0140662
Trme1400830g00001 67 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 28 66 IPR029047 -
Trme1400830g00001 67 PRINTS 70kDa heat shock protein signature 5 25 - -
Trme1400830g00001 67 PRINTS 70kDa heat shock protein signature 31 50 - -
Trme1400830g00001 67 PANTHER HEAT SHOCK PROTEIN 70KDA 1 65 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1400830g00001 Trme-Chr1400830 1 203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1400830g00001 1 67 Calmodulin-binding Proteins AT3G12580 76.471 8.06e-30 107