Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme139948g00001 ATGCGAGCTTTCACTCCAACGAGTGGTGTAGANGAAAAGGGTTATTTTGATCTAGTGGTTAAGATTTACTTCAAAGGGGTGCACCCAAAATACCCCAATGGTGGTCTAATGTCTCAACATTTAGACTCCTTGTCTATTGGTTCTATTTTGGATATAAAGGGTCCATTGGGACATATTGAGTATAATGGTAAAGGAAATTTTTTTGTTCATGGAGAACACAAATTTGCAAAGAGGTTAGCTATGTTGGTCGGTGGAACTGGGATAACACCGATTTATCAAGTGGTTCAAGCGATTCTGAAAGACCCAGAGGATCTAACTGAAATGCATGTTGT 332 0.3916 MRAFTPTSGVXEKGYFDLVVKIYFKGVHPKYPNGGLMSQHLDSLSIGSILDIKGPLGHIEYNGKGNFFVHGEHKFAKRLAMLVGGTGITPIYQVVQAILKDPEDLTEMHVV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme139948g00001 111 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 80 99 IPR001709 GO:0016491
Trme139948g00001 111 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 34 43 IPR001709 GO:0016491
Trme139948g00001 111 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 2 9 IPR001709 GO:0016491
Trme139948g00001 111 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 50 110 IPR039261 -
Trme139948g00001 111 SUPERFAMILY Riboflavin synthase domain-like 1 62 IPR017938 -
Trme139948g00001 111 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 111 IPR001834 GO:0016491
Trme139948g00001 111 Gene3D - 57 111 IPR039261 -
Trme139948g00001 111 Gene3D Translation factors 1 56 - -
Trme139948g00001 111 CDD cyt_b5_reduct_like 1 111 - -
Trme139948g00001 111 Pfam Oxidoreductase FAD-binding domain 1 61 IPR008333 -
Trme139948g00001 111 PRINTS Cytochrome B5 reductase signature 2 9 - -
Trme139948g00001 111 PRINTS Cytochrome B5 reductase signature 47 61 - -
Trme139948g00001 111 PRINTS Cytochrome B5 reductase signature 80 99 - -
Trme139948g00001 111 Pfam Oxidoreductase NAD-binding domain 81 111 IPR001433 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme139948g00001 Trme-Chr139948 8 339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme139948g00001 1 111 NADPH P450 reductases AT5G17770 36.036 3.19e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme139948g00001 K10534 - gmx:732634 198.364