Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme139836g00001 ATGAACTCCACACGCGACATAGACGGTCATGGCACTCACACATCAACCACTGCTGCTGGAAGCAAAGTTGAGGGTGCATCCTACTTTGGATATGCCTCCGGATCAGCCATAGGCATTGCTCCACATGCTCATGTATCCATGTACAAGGTATTGTGGAAAGAAGGAGCATATGTATCTGACACAATAGCCGCAATTGATAGTGCAATAGAAGACGGTGTAGATGTTCTTTCATTATCATTGGGTTTTGATGAGGCACCTTTGTACGAAGACCCAATAGCTATAGCCACATTTGCAGCTATGGAGAAAAACATTTTTGTAT 319 0.4389 MNSTRDIDGHGTHTSTTAAGSKVEGASYFGYASGSAIGIAPHAHVSMYKVLWKEGAYVSDTIAAIDSAIEDGVDVLSLSLGFDEAPLYEDPIAIATFAAMEKNIFV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme139836g00001 106 SUPERFAMILY Subtilisin-like 3 106 IPR036852 GO:0004252|GO:0006508
Trme139836g00001 106 Gene3D Peptidase S8/S53 domain 2 106 IPR036852 GO:0004252|GO:0006508
Trme139836g00001 106 ProSiteProfiles Serine proteases, subtilase domain profile. 1 106 - -
Trme139836g00001 106 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 106 IPR045051 -
Trme139836g00001 106 Pfam Subtilase family 2 104 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme139836g00001 Trme-Chr139836 81 571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme139836g00001 3 106 Subtilisin-like Serine Gene Family AT2G05920 62.500 1.12e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme139836g00001 - - psat:127132069 193.741