Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme139792g00001 TTGGAAACAGGGAAGACAACTTTATCTATCGGTGATGGTGCAAATGATGTCGGTATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGTGGAGCTGAAGGGATGCAGGTTAGATATGCATTTTCTTGA 129 0.4341 METGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQVRYAFS 42
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme139792g00001 42 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 3 37 - -
Trme139792g00001 42 Pfam haloacid dehalogenase-like hydrolase 5 30 - -
Trme139792g00001 42 Gene3D - 1 42 IPR023214 -
Trme139792g00001 42 SUPERFAMILY HAD-like 4 36 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme139792g00001 Trme-Chr139792 2 130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme139792g00001 3 40 Primary Pumps ATPases AT3G27870 86.842 1.65e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme139792g00001 K01530 - csav:115699111 72.0182