Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme139718g00001 GAAGGGAATGTTGTTGGGGAGGAAGAAATTGATAGTAGGTTGGTTCAGAAGAATGATGTGATTAAGATTATTCCGGGTGCCAAAGTTGCTTCTGATGGGCTTGTTGTTTGGGGACAGAGTCATGTGAATGAGAGTATGATAACTGGTGAGGCACGTCCTGTTTCTAAGAGGAAAGGTGATACTGTTATTGGTGGAACTGTGAATGAGAATGGTGTTTTGCATGTTAAGGCAACAAAAGTTGGATCAGAAAGTGCTCTTTCGCAGATTGTTCGACTTGTTGAGTCTGCTCAGATGGCTAAGGCTCCGGTGCAGAAGTTCGCTGATCGCATTTCCAAATTCTTTGTGCCTTTG 351 0.4359 EGNVVGEEEIDSRLVQKNDVIKIIPGAKVASDGLVVWGQSHVNESMITGEARPVSKRKGDTVIGGTVNENGVLHVKATKVGSESALSQIVRLVESAQMAKAPVQKFADRISKFFVPL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme139718g00001 117 Gene3D - 1 97 - -
Trme139718g00001 117 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 117 - -
Trme139718g00001 117 FunFam Copper-transporting ATPase 1, putative 1 97 - -
Trme139718g00001 117 Pfam E1-E2 ATPase 7 117 - -
Trme139718g00001 117 SUPERFAMILY Calcium ATPase, transduction domain A 8 93 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme139718g00001 Trme-Chr139718 222 572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme139718g00001 1 117 Primary Pumps ATPases AT1G63440 88.889 2.73e-68 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme139718g00001 K17686 - gmx:100816893 218.394