Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1396391g00001 GTTCCAGCATACTTCAATGACTCTCAGCGCCAGGCCACCAAGGATGCTGGTGTCATCGCTGGTCTTAATGTCATGCGTATCATCAACGAACCCACTGCTGCTGCCCTTGCCTATGGCCTTAATATGGAGCCCAACATTGATGATGCGAAGAACATTTTGATTTTTGACCTTGGTGGTG 178 0.4888 VPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAALAYGLNMEPNIDDAKNILIFDLGG 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1396391g00001 59 Gene3D - 1 59 - -
Trme1396391g00001 59 SUPERFAMILY Actin-like ATPase domain 1 42 IPR043129 -
Trme1396391g00001 59 FunFam Endoplasmic reticulum chaperone BiP 1 54 - -
Trme1396391g00001 59 Pfam Hsp70 protein 1 59 IPR013126 GO:0005524|GO:0140662
Trme1396391g00001 59 PANTHER HEAT SHOCK PROTEIN 70KDA 1 59 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1396391g00001 Trme-Chr1396391 25 202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1396391g00001 1 59 Calmodulin-binding Proteins AT5G02500 81.356 3.63e-27 99.4