Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1395369g00001 AGGTTTGAGATCAACGGAAACCCTAATTTCTTGTTTGTTTTGGTGTTCAATGTTGCCAATGCTAGTGACGTTTCTCGTGTTAGTGTCAAAGGGTCTAAGGCTGGATGGATTCCCATGAAACGCAATTGGGGACAAAAGTAG 141 0.4255 RFEINGNPNFLFVLVFNVANASDVSRVSVKGSKAGWIPMKRNWGQK 46
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1395369g00001 46 Gene3D - 1 46 IPR036749 -
Trme1395369g00001 46 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 9 46 IPR007117 -
Trme1395369g00001 46 PANTHER EXPANSIN-A15 1 46 IPR002963 GO:0009664
Trme1395369g00001 46 SUPERFAMILY PHL pollen allergen 1 45 IPR036749 -
Trme1395369g00001 46 Pfam Expansin C-terminal domain 1 45 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1395369g00001 Trme-Chr1395369 1 141 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1395369g00001 1 45 Expansin Gene Family AT5G39270 60.000 3.45e-15 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1395369g00001 - K20628 tpra:123901862 91.6633