Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme139369g00001 ATGACCATAGCTAAAGACAGAGTAAAGCCATCCCCAACACCTGACAGTTGGAAACTGCCCGAGATATTTGCAACAGGAGTAGTGATTGGCACTTACCTTGCTTTGGTTACTGTCCTGTTCTACTGGGCAGTAGTTGAGACCACTTTCTTTGAG 153 0.4575 MTIAKDRVKPSPTPDSWKLPEIFATGVVIGTYLALVTVLFYWAVVETTFFE 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme139369g00001 51 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 50 IPR023298 -
Trme139369g00001 51 Gene3D - 1 51 - -
Trme139369g00001 51 PANTHER CALCIUM-TRANSPORTING ATPASE 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme139369g00001 Trme-Chr139369 119 271 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme139369g00001 1 51 Primary Pumps ATPases AT1G17260 82.353 3.18e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme139369g00001 K01535 - gmx:100795836 105.531