Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme139262g00001 GTGAATAAGCTGGAAGAAAGCTTCGATTTCATCAACGAAGGAACAAAGCCGCTTGCTGCATATTTATTTACAAACGACAACAAGTTCAAGGAGGAATTTGTGAAGAATGTTTCTGCTGGGGGCGATGGATCAATAAGGTACCCACCTTACACTGATACAAAGCAGAAAACGATGAAGGCTCTAGTCGCCGGTGATGTTACTGGTGTAGTCCGTGCTCTTTTTGGATGGTCCTAG 234 0.4402 VNKLEESFDFINEGTKPLAAYLFTNDNKFKEEFVKNVSAGGDGSIRYPPYTDTKQKTMKALVAGDVTGVVRALFGWS 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme139262g00001 77 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 41 IPR016163 GO:0016620
Trme139262g00001 77 SUPERFAMILY ALDH-like 1 56 IPR016161 GO:0016491
Trme139262g00001 77 PANTHER ALDEHYDE DEHYDROGENASE 1 41 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme139262g00001 Trme-Chr139262 62 546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme139262g00001 1 77 Aldehyde Dehydrogenase Gene Family AT1G44170 30.709 9.41e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme139262g00001 K00128 - gmx:100803104 104.76