Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme139089g00001 ATGGTTGCTGAGGTTGCGCTGATGGAGGTTCAGATGAGAGTAGGTGAAGAGAGGAGTGTGGGGGNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCGCATTCGTGGTGATATGAGGGCAGGGACATTAATGAGGGAGCGTAAGTTGTGGTTGTATCGTGATAAGCGCATAATACAAGCTGGCATTGATTATTTACCTAAGAGTAAGTCTCCCAATGGTGAGCCAATTGCCACTAGTGTGATTGTCTCTGGTGGTTATGAGGATAATATGGAATTGGATAACGGTGATGTTATAATCTACACTGGCCATGGAGGACAGAAGAAGAATTCCTTGAGGCAAATTTGTGATCAGAAATTGGTGGATGGAAACCTTGCTTTAGAAAGGAGTATGCATTATGGCATTGAG 429 0.3846 MVAEVALMEVQMRVGEERSVGXXXXXXXXXXXXXXXXXXXRIRGDMRAGTLMRERKLWLYRDKRIIQAGIDYLPKSKSPNGEPIATSVIVSGGYEDNMELDNGDVIIYTGHGGQKKNSLRQICDQKLVDGNLALERSMHYGIE 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme139089g00001 143 Gene3D - 62 142 IPR036987 -
Trme139089g00001 143 ProSiteProfiles YDG domain profile. 40 143 IPR003105 -
Trme139089g00001 143 SMART G9a_1 62 143 IPR003105 -
Trme139089g00001 143 SUPERFAMILY PUA domain-like 63 141 IPR015947 -
Trme139089g00001 143 Pfam SAD/SRA domain 65 141 IPR003105 -
Trme139089g00001 143 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 64 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme139089g00001 Trme-Chr139089 21 530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme139089g00001 68 138 Su(var)3-9 homologs AT5G04940 57.746 3.01e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme139089g00001 K11420 - tpra:123924427 201.83