Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13903g00001 GAAACTGAAGAGATAATTGCCGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACCATTGCCGGTAATATTCTTGTTGGGAGCTTCTGTGCTCTCTCCAATAGAGGTGGTTTGGTCCATCCTCACACTTCCATAGAAGATTTGGATGAACTTTCTACGCTTCTTCAAGTTCCTTTGGTTGCCGGAACTGTGAACCGAGGTAGTGAAGTGATAGCTGCTGGAATGACAGTTAATGATTGGACAGCGTTTTGTGGTTCAGACACCACAGCAACAGAGCTCTCTGTAATTGAAAGTGTTTTCAAGCTGAGAGACTCGCAGCCTAGTGTCATAGTGGATGAGATGAGAAAATCACTCATTGATAGCTATGTCTGA 369 0.439 ETEEIIADVLGVEVFRQTIAGNILVGSFCALSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLRDSQPSVIVDEMRKSLIDSYV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13903g00001 122 Hamap Translation initiation factor 6 [eif6]. 1 122 IPR002769 GO:0042256|GO:0043022
Trme13903g00001 122 SUPERFAMILY Pentein 1 101 - -
Trme13903g00001 122 Gene3D - 1 102 - -
Trme13903g00001 122 SMART eIF6neu2 1 81 IPR002769 GO:0042256|GO:0043022
Trme13903g00001 122 Pfam eIF-6 family 1 80 IPR002769 GO:0042256|GO:0043022
Trme13903g00001 122 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 121 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13903g00001 Trme-Chr13903 305 764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13903g00001 1 122 Eukaryotic Initiation Factors Gene Family AT3G55620 90.164 2.22e-79 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13903g00001 K03264 - rcu:8275684 231.876