Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme139000g00001 TCTTCTAACCACACTTTATGCTCTTCTTCACACTCTACCACTTTCACCACATCCACTTCTTTCGAAATCGAACCTGAACCCGAGCCAGTGGATTTCGCGGCAGCCTTTGCATCTCAACGCTTCTTCTTCTCCTCCCCCGGAAGCTCCAACTCACTAATCGAATACACAAACAAAAATATCATCCAACATTCTTCGGTACCATTGACAGATAAGTCCAATAATGTTAAGCGTGAGAAGAAAGAGAAGATAGATAAAGAGGAGGTTTTGTTCAACGGAAGTGTGGCGGTACCAACCTACTCTCCCGACCCTTATACAGATTTCAGGATGTCGATGCAAGAGATGGTGGAGGCGCGTCCCGAGTTGATGGATGTGAAATCAAATTGGAATATCTTGCATGAGTTGCTTCTATGTTACCTTGCTCTCAACCCAAAGAATACTCACAAGTACATTCTCGGTGCTTTTGCGGATCTCCTCGTTACCCTCATGTCATTCTAG 495 0.4465 SSNHTLCSSSHSTTFTTSTSFEIEPEPEPVDFAAAFASQRFFFSSPGSSNSLIEYTNKNIIQHSSVPLTDKSNNVKREKKEKIDKEEVLFNGSVAVPTYSPDPYTDFRMSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKNTHKYILGAFADLLVTLMSF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme139000g00001 164 NCBIfam uncharacterized plant-specific domain TIGR01568 94 162 IPR006458 -
Trme139000g00001 164 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 10 161 IPR038933 GO:0045892
Trme139000g00001 164 MobiDBLite consensus disorder prediction 1 23 - -
Trme139000g00001 164 Pfam Transcriptional repressor, ovate 100 161 IPR006458 -
Trme139000g00001 164 ProSiteProfiles OVATE domain profile. 96 160 IPR006458 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trme139000g00001 Ovate 3.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme139000g00001 - - gmx:102660213 207.994