Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme138999g00001 TATCGTGCTCCTGAAGTCTTGCTTCAGTCTTCCCTTTATAGCTCCAAAGTTGACATGTGGGCTATGGGTGCTATCATGTCTGAGTTGTTCACTCTCAGTCCTCTATTTCCGGGTACCAGGTATCATGTTCTATCTATTTCTCTCTGCTTCTAA 153 0.4379 YRAPEVLLQSSLYSSKVDMWAMGAIMSELFTLSPLFPGTRYHVLSISLCF 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme138999g00001 50 Gene3D Transferase(Phosphotransferase) domain 1 1 42 - -
Trme138999g00001 50 Pfam Protein kinase domain 1 39 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme138999g00001 50 SUPERFAMILY Protein kinase-like (PK-like) 1 42 IPR011009 -
Trme138999g00001 50 ProSiteProfiles Protein kinase domain profile. 1 50 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme138999g00001 50 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme138999g00001 Trme-Chr138999 108 347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme138999g00001 1 41 MAP Kinase Gene Family AT4G11330 56.098 2.02e-12 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Trme138999g00001 Pkinase 2.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme138999g00001 K08829 - pop:7465471 75.485