Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme138931g00001 AATATGGAAGCTCGAGTTTCGGATTTTGGATTAGCCACATTGATGGAACCAAACAAGACTCATGTTTCTACAATTGTTGCTGGGACTTTCGGATACTTGGCTCCAGAATATTTTGATACCGGAAGAGCAACAGTGAAAGGGGATGTTTATAGTTTTGGAGTTGTGTTACTTGAGCTTTTAACAGGAAAGAAACCTAGTGATGAAACATTTATGGAAGAGGGAACCAAACTTGTCACATGGGTGAAAGCTGTAGTTCAAGAGAAGAAAGAGGAATTAGTTCTTGATAGTAGCTTAGGGTCATGTTGTCCAATGCATGAGGTCAACAAGGTGTTCAACATTGCAATGATGTGTCTTGAACCAGACCCTTTGAATAGACCAACCATGGC 386 0.4041 NMEARVSDFGLATLMEPNKTHVSTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPSDETFMEEGTKLVTWVKAVVQEKKEELVLDSSLGSCCPMHEVNKVFNIAMMCLEPDPLNRPTMA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme138931g00001 129 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme138931g00001 129 SUPERFAMILY Protein kinase-like (PK-like) 2 128 IPR011009 -
Trme138931g00001 129 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 128 - -
Trme138931g00001 129 Gene3D Transferase(Phosphotransferase) domain 1 1 129 - -
Trme138931g00001 129 Pfam Protein kinase domain 4 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme138931g00001 Trme-Chr138931 1 574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme138931g00001 1 128 Receptor kinase-like Gene Family AT2G35620 49.219 4.17e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Trme138931g00001 Pkinase 1.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme138931g00001 - - ahf:112703495 240.35