LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme138845g00001	GATTTTGGTCTTTCAAAGCTTGTTGGAAAAGATGAGAGTCAAGTTATGACAACAATAAGAGGAACTAGAGGCTATTTAGCACCTGAATGGTTATTGGAACGTGGAATTTCTGAGAAAAGTGATATTTATAGTTATGGAATGGTTTTGTTAGAGATGATTGGAGGGAGAAGAAATGTTTCAAAAGTTGAAGATCCTAGAGATAAGAGTAAGAAAAAGTGGGAATTTTTTCCTAAGATTGTGAATGAGAAATTGAGAGAAGGGAAATTGATGGAAATTGTGGATAAAAGGGTAGTGGAAAGTGGGAATTTTGATGAGAATGAGGTGAAAAGATTGGTGTTTATTGGTTTGTGGTGTATACAAGAGAAACCAAGATTGAGGCCTAGTATGGTTGAAGTTGTTGATATGCTTGAAGGACGTGTGACTGTGGAAGAGCCACCAGGTACTAGAATGATTCTTGTTGATATGTTAGCTGATGATGAAGATCCTACAGATCATAATCTTGCTAGGTTATTGACTCCTGTGTCTAGTAATAATGTTGATTGTACCTCTACTTACTCTTTAGGATCCACTAT	572	0.3619	DFGLSKLVGKDESQVMTTIRGTRGYLAPEWLLERGISEKSDIYSYGMVLLEMIGGRRNVSKVEDPRDKSKKKWEFFPKIVNEKLREGKLMEIVDKRVVESGNFDENEVKRLVFIGLWCIQEKPRLRPSMVEVVDMLEGRVTVEEPPGTRMILVDMLADDEDPTDHNLARLLTPVSSNNVDCTSTYSLGST	190

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme138845g00001	190	ProSiteProfiles	Protein kinase domain profile.	1	140	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trme138845g00001	190	PANTHER	OS07G0415500 PROTEIN	1	147	-	-
	Trme138845g00001	190	Gene3D	Transferase(Phosphotransferase) domain 1	1	146	-	-
	Trme138845g00001	190	SUPERFAMILY	Protein kinase-like (PK-like)	1	148	IPR011009	-
	Trme138845g00001	190	Pfam	Protein kinase domain	1	134	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme138845g00001	Trme-Chr138845	3	574	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme138845g00001	1	148	Receptor kinase-like Gene Family	AT5G20050	66.216	5.30e-57	184

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Trme138845g00001		Pkinase	2.6e-15	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme138845g00001	-		-	gmx:100779485	311.997