Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme138593g00001 GACCTGTTCGAAGTCCTCGCATCGAAGTCCAAAATTTACTTCATCGTTGAATTCGCCGCCGCTGGCGAACTCTTCGAAGAAGTAGCCGGCAAAGAAAAGCTTACCGAAGGCCACGCTAGAAGATACTTCCGGCAACTCATCTCCGCCGTGAAACACTGTCACTCTCGCGGCGTTTTCCACCGCGATCTTAAACTCGATAATCTCTTACTTGACGAGAATGATAATCTCAAAGTAACGGATTTCGGTTTAAGCGCCGTTAAAAACGAGATCCAACCTGACGGTTTACTTCACACCGTTTGTGGTACACCGTCCTACGTGGCACCGGAGATTCTCGCGAAGAAAGGCTACGACGGTGCGAAAGCTGATGTATGGTCATGCGGCGTCGTTTTGTTTGCTCTTACTACCGGATATTTACCGTTCAATGATTATAATATTACCGTGCTTTATAGAAAAATTTACCGCGGTCAATTTCGTTTACCGAAATGGATATCTTGTGATCTGAAGAATCTCTTATCACGTTTGTTGGATACGAATCCTAAGACAAGGATAACCGTTGATGAGATTCTTGAAGACCC 575 0.4539 DLFEVLASKSKIYFIVEFAAAGELFEEVAGKEKLTEGHARRYFRQLISAVKHCHSRGVFHRDLKLDNLLLDENDNLKVTDFGLSAVKNEIQPDGLLHTVCGTPSYVAPEILAKKGYDGAKADVWSCGVVLFALTTGYLPFNDYNITVLYRKIYRGQFRLPKWISCDLKNLLSRLLDTNPKTRITVDEILEDP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme138593g00001 192 FunFam Maternal embryonic leucine zipper kinase 1 192 - -
Trme138593g00001 192 Pfam Protein kinase domain 2 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme138593g00001 192 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme138593g00001 192 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 192 - -
Trme138593g00001 192 SMART serkin_6 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme138593g00001 192 Gene3D Transferase(Phosphotransferase) domain 1 1 192 - -
Trme138593g00001 192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 58 70 IPR008271 GO:0004672|GO:0006468
Trme138593g00001 192 SUPERFAMILY Protein kinase-like (PK-like) 2 191 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme138593g00001 Trme-Chr138593 1 575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme138593g00001 2 192 CBL-interacting serine-threonine protein kinases AT2G30360 65.969 5.69e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trme138593g00001 Pkinase 4.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme138593g00001 - K12761 gmx:100810319 314.309