Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme138515g00001 GATGATCAATATGCTAATGCTATCAGAAACTGTGACCCTGAAGGACCTCTGATGCTTTATGTGTCAAAGATGATTCCCGCTAACGATAAAGGAAGGTTTTTTGCTTTTGGACGTGTATTTGCTGGTAAAGTTTCAACTGGTTTGAAGGTCAGAATTATGGGACCAAATTTTGTCCCTGGGGAGAAGAAAGATTTGTATGTGAAAAGTGTTCAGAGAACTGTCATTTGGATGGGAAAGAGACAGGAGACTGTTGAGGATGTGCCTTGTGGTAACACAGTTGCTATGGTTGGTTTGGATCAATTTATCACCAAGAATGCTACATTGACAAATGAGAAGGAAGTCGATGCACACCCTATTCGTGCTATGAAGTTTTCTGTCTCACCTGTTGTGCGTGTTGCTGTTCAGTGCAAGGTTGCTTCAGATCTTCCTAAGCTTGTTGAAGGTCTCAAACGTCTTGCTAAGTCAGATCCTATGGTTGTTTGTACTATTGAGGAGTCTGGAGAACACATTGTTGCTGGTGCAGGAGAGCTTCATCTTGAGATCTGTTTGAAGGATTTGCAGGATGATTTCATGGG 575 0.4209 DDQYANAIRNCDPEGPLMLYVSKMIPANDKGRFFAFGRVFAGKVSTGLKVRIMGPNFVPGEKKDLYVKSVQRTVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMG 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme138515g00001 192 Gene3D Elongation Factor G (Translational Gtpase), domain 3 127 192 - -
Trme138515g00001 192 Pfam Elongation Factor G, domain III 128 190 IPR041095 -
Trme138515g00001 192 Gene3D Translation factors 1 125 - -
Trme138515g00001 192 CDD EF2_snRNP_III 128 192 - -
Trme138515g00001 192 FunFam Translation elongation factor 2 1 125 - -
Trme138515g00001 192 SUPERFAMILY EF-G C-terminal domain-like 125 190 IPR035647 -
Trme138515g00001 192 CDD EF2_II 16 111 - -
Trme138515g00001 192 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 192 - -
Trme138515g00001 192 FunFam Translation elongation factor 2 127 192 - -
Trme138515g00001 192 Pfam Elongation factor Tu domain 2 35 108 IPR004161 GO:0005525
Trme138515g00001 192 SUPERFAMILY Translation proteins 2 117 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme138515g00001 Trme-Chr138515 1 575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme138515g00001 1 192 Eukaryotic Initiation Factors Gene Family AT1G56070 96.354 6.13e-133 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme138515g00001 K03234 - aew:130751799 372.089