Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme138407g00001 TTGGACGATACATCAAGTTTCACAGGTGAAAAATCAGCAGGTCCAAATGCTAATTCACTCAGAGGCTTTAATGTAATAGACAGAATAAAGTCTAAAGTAGAGAGTTTATGCCCCAATACTGTCTCTTGTGCTGATATTCTTGCTGTGGCAGCAAGAGATTCAGTTGTTGCTCTTGGTGGACCTAGTTGGAGTGTACCATTGGGCAGAAGAGATTCAACAACAGCAAGTTTAAGTTCAGCTAACTCAGATTTGCCAGGTCCCTCTTCTGATGTAAGTGACCTTGCTAATGCTTTCTCCAACAAAGGTTTTTCAGTTAGAGAGGTGGTTGCTCTTTCAGGTATACTTTGCTAA 351 0.4103 MDDTSSFTGEKSAGPNANSLRGFNVIDRIKSKVESLCPNTVSCADILAVAARDSVVALGGPSWSVPLGRRDSTTASLSSANSDLPGPSSDVSDLANAFSNKGFSVREVVALSGILC 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme138407g00001 116 MobiDBLite consensus disorder prediction 1 20 - -
Trme138407g00001 116 PRINTS Plant peroxidase signature 40 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 PRINTS Plant peroxidase signature 106 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 PRINTS Plant peroxidase signature 59 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 PRINTS Plant peroxidase signature 21 34 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 MobiDBLite consensus disorder prediction 69 88 - -
Trme138407g00001 116 SUPERFAMILY Heme-dependent peroxidases 2 113 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 Pfam Peroxidase 7 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 PRINTS Haem peroxidase superfamily signature 59 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 PRINTS Haem peroxidase superfamily signature 107 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 PRINTS Haem peroxidase superfamily signature 41 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 Gene3D - 2 84 - -
Trme138407g00001 116 PANTHER PEROXIDASE 72-RELATED 1 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 ProSiteProfiles Plant heme peroxidase family profile. 1 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme138407g00001 116 Gene3D Peroxidase, domain 2 85 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme138407g00001 Trme-Chr138407 3 531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme138407g00001 1 113 Peroxidase AT5G05340 66.372 5.89e-48 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme138407g00001 K00430 - gmx:100799162 182.57