Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme138351g00001 GCAAATAGTGAACATCCAATTGCAAAAGCTGTTGTGGCACATGCTAAGAAACTGCGCCAGAGTTTTGTGTCTTCAAGCAATGAACAAGTTCAAGATGTGAATGACTTTGAGGTACACATGGGAAGTGGTGTAAGTGGAAAAGTGAAGGACAAGAAAGTTTTAGTTGGAAACAAGAGACTCATGTGTGCTTTTAATGTACCAATAAGTTCCAATGTGGAGAAGCACATATCTGAGAATGAAATTATGGCAAGAACTTGTGTATTAGTTTCAATTGAAGGAAAGATTGCTGGAGCATTCTCTGTGACTTCTTAG 312 0.3846 ANSEHPIAKAVVAHAKKLRQSFVSSSNEQVQDVNDFEVHMGSGVSGKVKDKKVLVGNKRLMCAFNVPISSNVEKHISENEIMARTCVLVSIEGKIAGAFSVTS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme138351g00001 103 Pfam haloacid dehalogenase-like hydrolase 3 97 - -
Trme138351g00001 103 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 101 IPR023299 GO:0000166
Trme138351g00001 103 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 1 102 - -
Trme138351g00001 103 Gene3D - 1 102 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme138351g00001 Trme-Chr138351 224 535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme138351g00001 2 102 Primary Pumps ATPases AT1G63440 40.594 2.58e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme138351g00001 K17686 - gmx:100793894 138.272