Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme138324g00001 ATGGAGGGTAGTTTGTTTAAGGTTGTGTTTCTTTTGCTTGTTTTAGGTCTTGTGAACACACTAGTGCATGGCCAAGGGACACGAGTAGGATTCTATTCGAGTACATGTTCGCAAGCTGAATCCATTGTTAAGTCGACGGTTGCAGCTCATGTTAACTCTGATTCTACTTTGGCTCCTGGCTTACTTAGGATGCATTTTCATGATTGTTTTGTCCAAGGTTGTGATGCCTCGGTTCTCATTTCCGGCTCAGGTACCGAAAAAACTGCATTTGCAAACCTTGCTTTAAGAGGTTATGAAGTTATTGATGATGCAAAGACAAAGCTCGAGGCTG 331 0.426 MEGSLFKVVFLLLVLGLVNTLVHGQGTRVGFYSSTCSQAESIVKSTVAAHVNSDSTLAPGLLRMHFHDCFVQGCDASVLISGSGTEKTAFANLALRGYEVIDDAKTKLEA 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme138324g00001 110 Pfam Peroxidase 43 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme138324g00001 110 ProSiteProfiles Plant heme peroxidase family profile. 26 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme138324g00001 110 Gene3D - 28 110 - -
Trme138324g00001 110 SUPERFAMILY Heme-dependent peroxidases 28 109 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme138324g00001 110 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trme138324g00001 110 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme138324g00001 110 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme138324g00001 110 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme138324g00001 110 PANTHER PEROXIDASE 25-RELATED 12 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme138324g00001 Trme-Chr138324 1 331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme138324g00001 8 110 Peroxidase AT5G39580 62.136 1.29e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme138324g00001 K00430 - gmx:100789782 164.081